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MSBuild error "CSC : error CS2001: Source File 'x' could not be found" with Linked Files after upgrading to Visual Studio 2012

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Greetings,

After automatically upgrading the project file for a .Net 4.0 web application to work with Visual Studio 2012 everything worked ok at first however when compiling I got lots of errors like this:

And when trying to build using MSBuild (passing just the project full path, with no additional parameters) in the "Developer Command Prompt for VS2012" we got basically the same errors:

Basically: "CSC : error CS2001: Source File 'x' could not be found"

All errors refer to Linked Files (aspx,cs,etc) located in other web applications projects located at a different deep in our code Branch (that's why all the '..\..\' at the beginning of the paths)

To me it looks like a problem with the file Length, I had the same problem a while ago when building the projects on our CI server using MSBuild, I was able to manage it by manipulating the project files before building them using a custom script without the need to move the branch around or reduce the deep of the projects, I didn't have to move anything, the important thing at the time it was that developers using Visual Studio 2010 could compile everything without problems. I learned by this that compiling/Building with MSBuild was different that with DevEnv/VS, and for example MSBuild didn't support building Setup projects and DevEnv did.

Since this is happening now with VS 2012/DevEnv 2012 , plus that VS 2012 doesn't support setup projects anymore (like msbuild), plus VS/DevEnv have the same problem with the file length, it looks like VS 2012 its finally using msbuild under the hood or are more tightly integrated, however I didn't find any article to confirm this. 

Changing the branch structure/changing the deep of the projects its not an option right now due to several reasons (large code base, high number of projects, risk , timing, effort, etc).

Does someone have an alternative solution or a fix for this issue in Visual Studio 2012?

Regards,


JPC


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